STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23036.1Probable F420-dependent oxidoreductase family protein. (303 aa)    
Predicted Functional Partners:
EFL21630.1
Non-ribosomal peptide synthetase.
   
 0.667
EFL20634.1
Conserved hypothetical protein.
  
     0.633
EFL28373.1
Methylenetetrahydromethanopterin reductase.
  
     0.609
EFL21586.1
FMN reductase.
 
 0.595
EFL22126.1
FMN reductase.
 
 0.571
EFL21581.1
SsuD family monooxygenase.
  
     0.555
EFL28917.1
Putative oxidoreductase.
  
     0.552
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.546
EFL21669.1
Organosulfonate monooxygenase.
  
     0.545
EFL23037.1
Putative N-acetylmuramoyl-L-alanine amidase.
       0.526
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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