STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23043.1YghA protein. (219 aa)    
Predicted Functional Partners:
EFL23041.1
Putative toxin-antitoxin system, toxin component.
       0.691
EFL23046.1
Dipeptide transporter 1 (ABC superfamily, membrane).
       0.677
EFL23044.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.672
EFL23045.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.671
EFL23042.1
ArsR family toxin-antitoxin system, antitoxin component.
  
    0.655
EFL23039.1
Cysteine desulfurase; Truncated CDS; unextendable partial coding region.
       0.605
EFL23049.1
Conserved hypothetical protein.
       0.605
EFL23050.1
Conserved hypothetical protein.
       0.605
EFL23051.1
Putative ATP/GTP binding protein.
       0.551
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.