Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL23047.1Dipeptide-binding lipoprotein. (598 aa)    
Predicted Functional Partners:
EFL23048.1
Dipeptide transporter (ABC superfamily, membrane).
 
 0.952
EFL27425.1
Putative transport system permease protein.
 
 0.930
EFL28703.1
Putative transport system permease protein.
 
 0.927
EFL28050.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.913
EFL28366.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein.
 
 0.913
EFL23046.1
Dipeptide transporter 1 (ABC superfamily, membrane).
 
 0.893
EFL28008.1
Dipeptide transport system permease DppC; Truncated CDS.
 
 0.887
EFL28009.1
Oligopeptide ABC transporter, permease.
 
 0.886
EFL23466.1
Oligopeptide ABC transporter, permease.
 
 0.866
EFL23464.1
Peptide ABC transporter, permease.
 
 0.800
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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