Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23066.1PE_PGRS family protein. (400 aa)    
Predicted Functional Partners:
EFL23064.1
Hypothetical protein.
       0.668
EFL23065.1
Hypothetical protein.
       0.668
EFL24449.1
Conserved hypothetical protein.
  
     0.615
EFL22315.1
PAS domain protein.
  
     0.588
EFL20573.1
Putative mucin-2 (MUC-2) (Intestinal mucin-2).
  
     0.517
EFL28329.1
Conserved hypothetical protein.
  
     0.513
EFL26640.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.511
EFL27310.1
Putative integral membrane transport protein.
  
     0.497
EFL22929.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.482
EFL21939.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.476
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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