STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23077.1XRE family transcriptional regulator. (419 aa)    
Predicted Functional Partners:
EFL23075.1
ABC transporter, permease/ATP-binding protein.
       0.570
EFL23076.1
Putative ABC transporter, ATP-binding protein.
       0.570
EFL23074.1
Glycogen debranching enzyme GlgX; Truncated CDS; Belongs to the glycosyl hydrolase 13 family.
       0.491
EFL23901.1
Putative transcriptional regulator, XRE family.
  
     0.457
EFL25805.1
Putative regulatory protein.
  
 
  0.447
EFL25353.1
LigA protein.
  
     0.446
EFL28198.1
Putative integral membrane protein.
  
     0.427
EFL20365.1
Conserved hypothetical protein.
  
     0.423
EFL20631.1
Conserved hypothetical protein.
  
     0.423
EFL21057.1
Conserved hypothetical protein.
  
     0.410
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.