Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23080.1Conserved hypothetical protein. (320 aa)    
Predicted Functional Partners:
EFL23079.1
Membrane protein.
 
     0.958
EFL23078.1
AroM protein.
 
     0.949
EFL27425.1
Putative transport system permease protein.
  
 0.914
EFL28703.1
Putative transport system permease protein.
  
 0.914
EFL23081.1
Putative IclR-family regulatory protein.
 
     0.892
EFL23082.1
Asp-specific dipeptidase; Belongs to the peptidase S51 family.
 
     0.837
EFL23044.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.610
EFL23468.1
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
  
  0.610
EFL23476.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.610
EFL23486.1
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
  
  0.610
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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