STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23097.1Putative endo-1,3-beta-glucanase. (475 aa)    
Predicted Functional Partners:
EFL27212.1
Putative glycosyl hydrolase.
 
   
 0.755
EFL27682.1
Endo-1,4-beta-xylanase A (Xylanase A) (1,4-beta-D-xylanohydrolase A).
   
 0.675
EFL25891.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
  
  
 0.609
EFL25893.1
Cellulose 1,4-beta-cellobiosidase.
  
  
 0.606
EFL27681.1
alpha-L-arabinofuranosidase (Arabinosidase).
  
     0.593
EFL22192.1
alpha-L-arabinofuranosidase (Arabinosidase).
  
     0.578
EFL23096.1
1,4-alpha-glucan branching enzyme.
       0.562
EFL21623.1
Lipolytic enzyme, G-D-S-L; Truncated CDS.
  
     0.543
EFL26282.1
Glycosyl hydrolase family 10.
  
 0.520
EFL21738.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
  
    0.519
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.