STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23101.1Putative signal transduction histidine kinase. (577 aa)    
Predicted Functional Partners:
EFL23102.1
Putative two-component response regulator.
 
 0.994
EFL26714.1
Two-component system response regulator.
 
 0.986
EFL22809.1
Sensor histidine kinase/response regulator.
    
 0.933
EFL27138.1
Sensor histidine kinase/response regulator.
    
 0.868
EFL23100.1
C4-dicarboxylate transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.817
EFL23104.1
Extracellular solute-binding domain protein.
       0.684
EFL23105.1
Putative ABC-type sugar transport system, permease component.
       0.676
EFL20670.1
Sensor histidine kinase/response regulator.
    
0.615
EFL22737.1
Conserved hypothetical protein.
       0.605
EFL23137.1
Putative ABC-type sugar transport system, permease component.
       0.605
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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