STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23111.1Carboxymethylenebutenolidase. (248 aa)    
Predicted Functional Partners:
EFL28285.1
Catechol 1,2-dioxygenase.
   
 
  0.793
EFL29240.1
Hydroxyquinol 1,2-dioxygenase (1,2-HQD).
   
 
  0.793
EFL20351.1
Hypothetical protein.
  
 
 0.737
EFL29239.1
Maleylacetate reductase.
  
 
 0.737
EFL27070.1
Putative muconate cycloisomerase 1 (Muconate cycloisomerase I)(Cis,cis-muconate lactonizing enzyme I) (MLE); Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
 
  0.721
EFL21301.1
Mandelate racemase/muconate lactonizing enzyme family protein.
   
 
  0.684
EFL23110.1
Putative MarR-family transcriptional regulator.
       0.617
EFL23112.1
Glyoxalase.
       0.598
EFL21630.1
Non-ribosomal peptide synthetase.
  
 
 0.580
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 
  0.580
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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