STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23120.1Putative FG-GAP repeat protein. (865 aa)    
Predicted Functional Partners:
EFL20431.1
Conserved hypothetical protein.
  
  
  0.773
EFL29401.1
Collagen alpha-1(XI) chain protein.
  
   0.748
EFL22394.1
Translation initiation factor IF-2.
  
     0.735
EFL26114.1
Putative ATP/GTP-binding protein.
  
     0.721
EFL28409.1
Putative pectinesterase/pectate lyase protein.
 
  
 0.718
EFL23512.1
LigA protein.
  
     0.711
EFL23090.1
Putative secreted lyase.
  
  0.700
EFL23091.1
Putative secreted lyase.
  
  0.700
EFL26282.1
Glycosyl hydrolase family 10.
 
 0.690
EFL27683.1
Glycosyl hydrolase family 62.
  
     0.680
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.