STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23135.1Polysaccharide deacetylase. (766 aa)    
Predicted Functional Partners:
EFL25118.1
Glycosyl transferase.
  
 
 0.957
EFL25894.1
Glycosyl transferase.
  
 
 0.957
EFL23001.1
Pas:ggdef.
  
 
 0.861
EFL23898.1
Putative tetratricopeptide repeat protein.
  
 
 0.861
EFL21646.1
Putative dolichyl-phosphate beta-glucosyltransferase.
  
 
 0.795
EFL22809.1
Sensor histidine kinase/response regulator.
  
  
 0.770
EFL25632.1
Putative CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase.
  
 
 0.770
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 0.753
EFL27778.1
Putative glucosyltransferase.
    
 0.747
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.722
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.