Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL23147.1Putative integral membrane protein. (179 aa)    
Predicted Functional Partners:
EFL23146.1
Hypothetical hydrophilic protein.
 
     0.960
EFL23149.1
Sterol esterase.
 
     0.944
EFL21996.1
Mg++ transport, ATPase.
  
  
 0.737
EFL23143.1
ATP-dependent Clp protease, ATP-binding subunit ClpC.
       0.495
EFL23144.1
PE-PGRS family protein.
       0.495
EFL23145.1
Hypothetical protein.
       0.495
EFL21135.1
Putative ACT domain protein.
  
     0.454
EFL21164.1
Conserved hypothetical protein.
  
     0.414
EFL25793.1
Putative acetyltransferase.
  
     0.405
EFL23272.1
Putative membrane protein.
  
     0.403
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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