STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23154.1MarR family transcriptional regulator. (174 aa)    
Predicted Functional Partners:
EFL23155.1
Putative integral membrane protein.
       0.868
EFL27016.1
Putative DNA-binding transcriptional regulator.
  
    0.839
EFL23153.1
Pks14 protein.
       0.832
EFL23156.1
Hypothetical cytosolic protein.
       0.825
EFL23157.1
Putative membrane protein.
       0.825
EFL22360.1
NAD-dependent deacetylase 2.
   
    0.809
EFL27741.1
Conserved hypothetical protein; Unextendable partial coding region.
   
    0.809
EFL22273.1
Transcriptional regulator DarR.
   
    0.786
EFL28699.1
Transcriptional regulator DarR.
   
    0.786
EFL23161.1
MarR-family transcriptional regulator.
 
   
0.783
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.