STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23155.1Putative integral membrane protein. (445 aa)    
Predicted Functional Partners:
EFL23154.1
MarR family transcriptional regulator.
       0.868
EFL23153.1
Pks14 protein.
       0.816
EFL23156.1
Hypothetical cytosolic protein.
       0.639
EFL23157.1
Putative membrane protein.
       0.639
EFL20910.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.605
EFL25298.1
Transcriptional regulator.
       0.605
EFL27221.1
Conserved hypothetical protein.
  
     0.533
EFL27207.1
Conserved hypothetical protein.
  
     0.531
EFL24309.1
Conserved hypothetical protein.
   
    0.521
EFL23152.1
Putative methylmalonyl-CoA mutase.
       0.451
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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