STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23161.1MarR-family transcriptional regulator. (158 aa)    
Predicted Functional Partners:
EFL23158.1
Conserved hypothetical protein.
       0.804
EFL23159.1
Conserved hypothetical protein.
       0.804
EFL23160.1
Conserved hypothetical protein.
       0.804
EFL23154.1
MarR family transcriptional regulator.
 
   
0.783
EFL23153.1
Pks14 protein.
 
     0.742
EFL23156.1
Hypothetical cytosolic protein.
       0.742
EFL23157.1
Putative membrane protein.
       0.742
EFL21060.1
Putative transcriptional regulatory protein.
  
   
 0.472
EFL27013.1
Putative cytochrome oxidase assembly protein.
  
     0.448
EFL25702.1
Putative DNA or RNA helicase of superfamily II.
  
  
  0.447
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.