Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL23168.1Putative cellulose-binding protein. (312 aa)    
Predicted Functional Partners:
EFL23167.1
Large Ala/Glu-rich protein.
 
     0.913
EFL24341.1
Putative integral membrane protein.
  
 
  0.804
EFL22723.1
Putative DNA-binding protein.
  
   
 0.728
EFL24344.1
Putative ATP/GTP-binding protein.
 
  
 0.725
EFL26159.1
Putative membrane protein.
  
     0.721
EFL24343.1
Putative membrane protein.
  
     0.720
EFL23169.1
Conserved hypothetical protein.
       0.713
EFL23171.1
Putative ABC transporter transmembrane protein.
 
     0.707
EFL24990.1
Putative thymidylate kinase.
  
  
  0.697
guaA
GMP synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.
  
 
  0.696
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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