STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23170.1Putative ABC transporter, ATP-binding protein. (410 aa)    
Predicted Functional Partners:
EFL23171.1
Putative ABC transporter transmembrane protein.
 
     0.944
EFL24435.1
ABC transporter membrane-spanning protein.
  
 
 0.661
EFL28025.1
Putative ABC transporter integral membrane protein.
 
     0.640
EFL22892.1
Putative ABC transporter, ATP binding protein.
  
  
  0.601
EFL29308.1
Putative ABC transporter transmembrane protein.
 
     0.544
EFL29153.1
Putative ABC transporter, ATP-binding protein.
  
 
 0.500
EFL23168.1
Putative cellulose-binding protein.
 
     0.486
EFL22541.1
Putative ABC transporter, ATP-binding protein; Truncated CDS; unextendable partial coding region.
  
  
  0.484
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.482
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.457
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.