STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23170.1Putative ABC transporter, ATP-binding protein. (410 aa)    
Predicted Functional Partners:
EFL23171.1
Putative ABC transporter transmembrane protein.
 
     0.944
EFL28025.1
Putative ABC transporter integral membrane protein.
 
     0.639
EFL24128.1
Putative ABC transporter membrane protein.
  
 0.634
EFL24754.1
Putative integral membrane protein.
  
 0.634
EFL26934.1
Translation initiation factor IF-2.
  
 0.634
EFL26935.1
Putative transmembrane transport protein.
  
 0.634
EFL28760.1
Putative integral membrane protein.
  
 0.634
EFL24752.1
Putative integral membrane protein.
   
 0.613
EFL22892.1
Putative ABC transporter, ATP binding protein.
  
  
  0.586
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.565
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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