STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23185.1Conserved hypothetical protein. (68 aa)    
Predicted Functional Partners:
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.509
EFL29029.1
Benzoate dioxygenase, ferredoxin reductase component.
     
 0.488
EFL27601.1
Polyketide synthase; Truncated CDS.
   
 0.448
EFL21436.1
Rieske family iron-sulfur cluster-binding protein; Unextendable partial coding region.
   
 
 0.431
EFL27154.1
C-5 sterol desaturase (Sterol-C5-desaturase).
   
 0.426
EFL28672.1
Aldehyde oxidase and xanthine dehydrogenase domains protein.
  
 
 0.425
EFL20373.1
Putative type I polyketide synthase WcbR.
   
 0.418
EFL23389.1
Putative ABC transporter, ATP-binding protein; Truncated CDS.
   
 0.403
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.