STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23203.1AMP-dependent synthetase and ligase. (486 aa)    
Predicted Functional Partners:
EFL23200.1
Methylaspartate mutase subunit E (MutE) superfamily protein.
 
 0.951
EFL21630.1
Non-ribosomal peptide synthetase.
 
0.946
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.945
EFL28179.1
Putative phosphopantetheine attachment site; Unextendable partial coding region.
 0.926
EFL23202.1
Putative pyridoxal-dependent decarboxylase, C- sheet domain protein.
 
    0.925
EFL27601.1
Polyketide synthase; Truncated CDS.
 
0.924
EFL23201.1
Putative B12 binding domain protein.
 
  
  0.920
EFL28780.1
Non-ribosomal peptide synthetase.
 
0.911
EFL28210.1
Erythronolide synthase, modules 5 and 6 (ORF 3) (6-deoxyerythronolide B synthase III) (DEBS 3).
 
 0.909
EFL22140.1
Polyketide synthase.
  
 0.898
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.