STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23208.1Putative phosphopantetheine attachment site. (90 aa)    
Predicted Functional Partners:
EFL23207.1
Putative acyl-CoA dehydrogenase.
 
  
  0.948
EFL21630.1
Non-ribosomal peptide synthetase.
  
 0.941
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.929
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 0.922
EFL23206.1
Putative peptidase C14, caspase catalytic subunit p20.
 
  
  0.905
EFL23210.1
Conserved hypothetical protein.
    
  0.877
EFL27919.1
Nonribosomal peptide synthetase DhbF.
  
 0.847
EFL28206.1
Dimodular nonribosomal peptide synthetase.
  
 0.847
EFL23209.1
Conserved hypothetical protein.
       0.837
EFL28177.1
Linear gramicidin synthetase LgrC.
  
 0.834
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.