STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23213.1dTDP-4-keto-6-deoxy-L-hexose2,3-dehydratase. (464 aa)    
Predicted Functional Partners:
EFL21630.1
Non-ribosomal peptide synthetase.
  
 
 0.976
EFL23216.1
Daunorubicin biosynthesis sensory transduction protein DnrJ; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.971
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.970
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 
 0.966
EFL27759.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
    
 0.962
EFL23214.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
    
  0.958
EFL23215.1
Glucose-1-phosphate thymidylyltransferase.
     
 0.941
EFL23220.1
Beta-ketoacyl synthase.
 
 
 0.925
EFL21631.1
Non-ribosomal peptide synthetase, component; Overlaps another CDS with the same product name.
  
 
 0.915
EFL28780.1
Non-ribosomal peptide synthetase.
  
 
 0.915
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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