STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23273.1Putative TetR-family transcriptional regulator. (241 aa)    
Predicted Functional Partners:
EFL23274.1
Conserved hypothetical protein.
       0.884
EFL23271.1
Conserved hypothetical protein.
 
     0.786
EFL23272.1
Putative membrane protein.
       0.785
EFL26086.1
Conserved hypothetical protein.
  
     0.614
EFL24701.1
Putative membrane protein.
  
     0.603
EFL23275.1
Putative secreted protein.
       0.548
EFL27131.1
Conserved hypothetical protein.
  
     0.547
EFL27029.1
Conserved hypothetical protein.
  
     0.520
EFL22923.1
Conserved hypothetical protein.
  
 
   0.502
EFL21060.1
Putative transcriptional regulatory protein.
  
     0.491
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.