STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23274.1Conserved hypothetical protein. (88 aa)    
Predicted Functional Partners:
EFL23273.1
Putative TetR-family transcriptional regulator.
       0.884
EFL23272.1
Putative membrane protein.
       0.781
EFL23271.1
Conserved hypothetical protein.
  
    0.736
EFL23275.1
Putative secreted protein.
       0.556
EFL22587.1
Hypothetical protein.
  
  
 0.506
EFL23234.1
O-methyltransferase.
  
  
 0.506
EFL23441.1
O-methyltransferase.
  
  
 0.506
EFL25838.1
O-methyltransferase, family 3.
  
  
 0.506
EFL26168.1
O-methyltransferase.
  
  
 0.506
EFL26483.1
O-methyltransferase.
  
  
 0.506
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.