STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23295.1LigA protein. (432 aa)    
Predicted Functional Partners:
EFL22597.1
PE-PGRS family protein.
  
     0.672
EFL28194.1
Conserved hypothetical protein.
  
     0.658
EFL23619.1
55.5 kDa and 49.5 kDa sporulation proteins (ORF1590 and ORF1422).
  
     0.651
EFL27295.1
Conserved hypothetical protein.
  
     0.633
EFL28192.1
Putative toxin-antitoxin system, toxin component.
  
     0.606
EFL23296.1
Conserved hypothetical protein.
       0.581
EFL27292.1
Conserved hypothetical protein.
  
     0.573
EFL27086.1
Conserved hypothetical protein.
  
     0.556
EFL23294.1
protein-L-isoaspartate(D-aspartate) O-methyltransferase.
 
     0.549
EFL24787.1
Putative hydrolase, NUDIX family.
  
  
  0.548
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.