STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23299.1Regulatory protein DnrI. (271 aa)    
Predicted Functional Partners:
EFL23300.1
TetR family transcriptional regulator.
       0.737
EFL23720.1
LigA protein.
 
 
    0.643
EFL22538.1
LuxR family transcriptional regulator; Unextendable partial coding region.
 
    0.641
EFL26663.1
LuxR family transcriptional regulator.
 
    0.618
EFL27930.1
Putative transcriptional regulator.
 
    0.606
EFL28306.1
Regulatory protein AfsR.
 
     0.581
EFL23301.1
Nitroreductase.
       0.522
EFL28867.1
LuxR family protein kinase/transcriptional regulator.
    0.508
EFL28235.1
Conserved hypothetical protein.
  
     0.416
fbiD
2-phospho-L-lactate guanylyltransferase CofC; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
  
     0.407
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.