STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23301.1Nitroreductase. (197 aa)    
Predicted Functional Partners:
EFL21916.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
    
 0.725
EFL24220.1
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
 
 0.697
EFL27679.1
Putative NADH dehydrogenase/NAD(P)H nitroreductase; Unextendable partial coding region.
  
  
 
0.678
EFL23524.1
Nitroreductase.
  
  
 
0.673
EFL23407.1
Thiazole biosynthesis adenylyltransferase ThiF.
    
 0.657
EFL26603.1
Ribonuclease HI.
    
 0.607
EFL21917.1
cob(II)yrinic acid a,c-diamide reductase; Unextendable partial coding region.
  
 
 0.579
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 0.573
cobT
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 
 0.571
EFL22847.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
    
 0.552
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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