STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23302.1Putative limonene-1,2-epoxide hydrolase. (135 aa)    
Predicted Functional Partners:
EFL23303.1
NAD-dependent epimerase/dehydratase.
 
     0.779
EFL23304.1
Involved in polyketide synthesis.
 
    0.755
EFL24890.1
PE-PGRS family protein.
  
     0.589
EFL23305.1
Conserved hypothetical protein.
       0.467
EFL23306.1
Putative transcriptional regulator, PadR family.
       0.467
EFL27945.1
Putative cupin domain protein.
  
     0.465
EFL29228.1
Secreted protein.
 
    0.465
EFL26264.1
3-oxoadipate:succinyl-CoA transferase, A subunit.
  
     0.413
EFL29092.1
Putative flavoCytochrome c.
  
  
  0.413
EFL24534.1
CalU12 protein.
  
     0.404
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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