STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23306.1Putative transcriptional regulator, PadR family. (361 aa)    
Predicted Functional Partners:
EFL23305.1
Conserved hypothetical protein.
 
     0.960
EFL23296.1
Conserved hypothetical protein.
       0.605
EFL23292.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
       0.604
EFL21604.1
Conserved hypothetical protein.
  
    0.521
EFL23303.1
NAD-dependent epimerase/dehydratase.
       0.512
EFL23304.1
Involved in polyketide synthesis.
       0.512
EFL23307.1
PPOX class probable F420-dependent enzyme family protein.
       0.493
EFL24248.1
Alanine-rich protein.
  
    0.485
EFL23302.1
Putative limonene-1,2-epoxide hydrolase.
       0.467
EFL22929.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.428
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.