STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23307.1PPOX class probable F420-dependent enzyme family protein. (143 aa)    
Predicted Functional Partners:
EFL28416.1
Probable F420-dependent oxidoreductase family protein.
 
   
 0.732
EFL26967.1
Conserved hypothetical protein.
   
    0.601
EFL23906.1
Probable F420-dependent oxidoreductase family protein.
 
   
 0.588
EFL23305.1
Conserved hypothetical protein.
       0.493
EFL23306.1
Putative transcriptional regulator, PadR family.
       0.493
EFL25526.1
Conserved hypothetical protein.
  
     0.475
pdxT
Glutamine amidotransferase subunit PdxT (Glutamineamidotransferase glutaminase subunit pdxT); Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.
     
 0.473
EFL22789.1
Conserved hypothetical protein.
      
 0.440
EFL28555.1
Conserved hypothetical protein.
  
  
 0.414
EFL27263.1
PPOX class probable F420-dependent enzyme.
  
   
 0.412
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.