STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23308.1LigA protein. (906 aa)    
Predicted Functional Partners:
EFL20573.1
Putative mucin-2 (MUC-2) (Intestinal mucin-2).
  
     0.609
EFL22094.1
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1).
  
     0.556
EFL21742.1
Putative large secreted protein.
  
     0.549
EFL26717.1
Conserved hypothetical protein.
  
     0.494
EFL28696.1
LigA protein.
  
     0.470
EFL23309.1
NADPH:quinone oxidoreductase or alcohol dehydrogenase.
       0.453
EFL22278.1
Conserved hypothetical protein.
  
     0.450
EFL23343.1
Putative sugar hydrolase.
  
     0.429
EFL28575.1
Putative acetyltransferase.
  
     0.419
EFL28329.1
Conserved hypothetical protein.
  
     0.416
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.