Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL23313.1Amino acid ABC transporter, ATP-binding protein. (253 aa)    
Predicted Functional Partners:
EFL23312.1
ABC-type amino acid transport system, permease component.
 0.998
EFL20468.1
His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease.
 0.945
EFL22785.1
Glutamate permease; Overlaps another CDS with the same product name.
 
 0.945
EFL22786.1
Glutamate permease; Overlaps another CDS with the same product name.
 
 0.945
EFL22404.1
Glutamate transport system permease GluD.
 
 0.944
EFL22405.1
Glutamate permease.
 
 0.944
EFL28978.1
His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease.
 0.944
EFL23311.1
Secreted protein.
 
 0.942
EFL20560.1
His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease.
 0.935
EFL25849.1
Ectoine/hydroxyectoine ABC transporter, permease EhuC.
 
 0.935
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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