STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23314.1Putative methyltransferase. (258 aa)    
Predicted Functional Partners:
EFL21630.1
Non-ribosomal peptide synthetase.
    
 0.729
EFL23315.1
Conserved hypothetical protein.
 
     0.668
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.661
EFL27919.1
Nonribosomal peptide synthetase DhbF.
    
  0.645
EFL28206.1
Dimodular nonribosomal peptide synthetase.
    
  0.645
EFL27601.1
Polyketide synthase; Truncated CDS.
    
 0.621
EFL28177.1
Linear gramicidin synthetase LgrC.
    
  0.611
EFL28178.1
Non-ribosomal peptide synthetase; Unextendable partial coding region.
    
  0.611
EFL28179.1
Putative phosphopantetheine attachment site; Unextendable partial coding region.
    
  0.611
EFL21637.1
Putative phosphopantetheine attachment site.
 
  
  0.497
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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