STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23322.1Extracellular small neutral protease (Snapalysin) (Extracellular metalloprotease); Belongs to the peptidase M7 family. (219 aa)    
Predicted Functional Partners:
EFL23567.1
Conserved hypothetical protein.
  
     0.643
EFL24664.1
Putative DNA-binding protein.
  
     0.608
EFL23321.1
Small neutral protease regulatory protein; Belongs to the LysR transcriptional regulatory family.
 
     0.596
EFL23083.1
Thermolysin metallopeptidase.
  
     0.566
EFL23323.1
Hypothetical protein.
       0.530
EFL25161.1
Thermolysin metallopeptidase; Extracellular zinc metalloprotease.
  
     0.515
EFL25948.1
S37 family peptidase.
  
     0.501
EFL23084.1
Thermolysin metallopeptidase; Extracellular zinc metalloprotease.
  
     0.500
EFL23085.1
Thermolysin metallopeptidase; Extracellular zinc metalloprotease.
  
     0.488
EFL22278.1
Conserved hypothetical protein.
  
     0.484
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.