STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23329.1AraC family transcriptional regulator. (237 aa)    
Predicted Functional Partners:
EFL23330.1
Hypothetical protein.
       0.890
glsA
Thermolabile glutaminase; Belongs to the glutaminase family.
       0.889
EFL22809.1
Sensor histidine kinase/response regulator.
    
 0.800
EFL26930.1
Glutamate synthase large subunit.
    
  0.678
EFL23332.1
Putative N-acetylmuramoyl-L-alanine amidase.
       0.622
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
     
 0.613
EFL20681.1
acyl-CoA dehydrogenase.
       0.605
EFL22500.1
Putative integral membrane protein.
       0.605
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.590
EFL27138.1
Sensor histidine kinase/response regulator.
    
 0.589
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.