STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23334.1Zinc finger, UBP-type. (86 aa)    
Predicted Functional Partners:
EFL23333.1
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
     0.928
EFL23069.1
Putative calcium-binding protein.
   
 0.788
EFL28026.1
Putative calcium binding protein.
   
 0.788
EFL28202.1
Putative calcium binding protein.
   
 0.788
EFL29194.1
Putative calcium-binding protein.
   
 0.788
EFL23337.1
Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family.
     
 0.768
EFL28265.1
Putative LigA.
   
 0.765
EFL27705.1
Putative thioredoxin reductase.
 
  
 0.718
EFL23335.1
Acetyltransferase, GNAT family protein.
       0.584
EFL24562.1
Putative membrane protein.
   
 0.482
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.