STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23342.1Putative SIS domain protein. (356 aa)    
Predicted Functional Partners:
EFL26930.1
Glutamate synthase large subunit.
   
 0.941
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.897
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
   
 0.895
EFL25168.1
N-acetylglucosamine-6-phosphate deacetylase.
    
 0.889
EFL26747.1
Glutamine synthetase, type I.
  
 
 0.887
EFL20874.1
Putative glutamine synthetase.
  
 
 0.886
EFL27004.1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.885
EFL26678.1
Glutamine synthetase, type I.
  
 
 0.883
EFL22018.1
Glutamine synthetase.
  
 
 0.882
EFL25610.1
Mannose-6-phosphate isomerase, class I.
     
 0.882
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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