STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23345.1Transcriptional regulator, GntR-family. (257 aa)    
Predicted Functional Partners:
EFL23346.1
Putative integral membrane protein.
       0.753
EFL26910.1
Putative regulatory protein KorSA, GntR-family transcriptional regulator.
  
     0.725
EFL24103.1
Putative transcriptional regulator, GntR family.
  
     0.684
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
     
  0.647
EFL23342.1
Putative SIS domain protein.
       0.636
EFL23351.1
Acetyltransferase, GNAT family protein.
       0.572
EFL23356.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.572
EFL23357.1
Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
       0.572
EFL25168.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.563
EFL29383.1
Putative GntR-family transcriptional regulatory protein.
  
     0.558
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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