STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23355.1Putative FGGY family carbohydrate kinase, N- domain protein. (489 aa)    
Predicted Functional Partners:
EFL23352.1
Putative FGGY family carbohydrate kinase, N- domain protein.
 
  
 
0.815
EFL21784.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.782
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
  
 
 0.779
xylB
Xylulokinase.
 
  
 
0.770
EFL26309.1
Xylulokinase; Belongs to the FGGY kinase family.
 
  
 
0.747
EFL23353.1
DeoR family transcriptional regulator.
 
   
 0.733
EFL28772.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.695
EFL24673.1
6-phosphogluconate dehydrogenase (decarboxylating).
  
 
 0.692
EFL27005.1
6-phosphogluconolactonase.
   
 0.681
EFL25386.1
Shikimate kinase.
     
 0.679
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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