STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23378.1Putative secreted protein. (362 aa)    
Predicted Functional Partners:
EFL23379.1
Hypothetical protein.
       0.822
EFL23382.1
Conserved hypothetical protein.
 
     0.772
EFL23380.1
Molybdopterin converting factor, subunit 2.
       0.728
EFL23381.1
Putative membrane protein.
       0.700
EFL23383.1
Nudix family hydrolase.
       0.675
EFL26170.1
DNA polymerase III, delta subunit.
 
     0.674
whiB-6
Transcription factor WhiB family protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
   
 0.593
whiA
Probable transcriptional regulatory protein whia; Involved in cell division and chromosome segregation.
  
     0.588
EFL21380.1
MerR family transcriptional regulator.
  
     0.552
EFL28442.1
Putative DNA or RNA helicase, Superfamily I.
  
     0.552
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.