Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23415.1Conserved hypothetical protein. (79 aa)    
Predicted Functional Partners:
EFL23413.1
Collagen alpha-1(II) chain (Alpha-1 type II collagen).
       0.768
EFL23414.1
Putative hydrolase.
       0.768
EFL23416.1
TetR family transcriptional regulator.
       0.768
EFL23417.1
Putative ATP-binding protein.
       0.725
EFL23418.1
Putative integral membrane protein.
       0.664
EFL23409.1
Putative reductase.
       0.572
EFL23410.1
Putative integral membrane protein; Unextendable partial coding region.
       0.572
EFL23407.1
Thiazole biosynthesis adenylyltransferase ThiF.
       0.520
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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