STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23427.1Conserved hypothetical protein. (200 aa)    
Predicted Functional Partners:
EFL23426.1
Conserved hypothetical protein.
       0.807
EFL23425.1
PHP domain N- region family protein.
       0.743
EFL26884.1
ABC-2.
  
     0.665
EFL26392.1
Conserved hypothetical protein.
  
     0.639
EFL27188.1
ABC transporter, ATP-binding protein.
  
     0.623
EFL21443.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.604
EFL23430.1
Integral membrane protein DUF6 domain protein.
       0.600
EFL27131.1
Conserved hypothetical protein.
  
     0.599
EFL23359.1
Putative tetratricopeptide repeat protein.
  
     0.579
EFL26088.1
Putative secreted protein.
  
     0.570
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.