Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL23441.1O-methyltransferase. (176 aa)    
Predicted Functional Partners:
EFL23440.1
RNA polymerase sigma-70 factor, ECF subfamily.
     
 0.721
EFL25838.1
O-methyltransferase, family 3.
  
     0.712
EFL23439.1
Putative membrane protein.
       0.692
EFL21377.1
Glycine dehydrogenase; Truncated CDS; Belongs to the GcvP family.
     
  0.670
EFL23437.1
Sec-independent protein translocase TatB-like protein.
       0.633
EFL23436.1
Conserved hypothetical protein.
       0.628
EFL20373.1
Putative type I polyketide synthase WcbR.
   
 0.569
EFL20777.1
Polyketide synthase.
   
 0.565
EFL28210.1
Erythronolide synthase, modules 5 and 6 (ORF 3) (6-deoxyerythronolide B synthase III) (DEBS 3).
   
 0.565
EFL23274.1
Conserved hypothetical protein.
  
  
 0.527
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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