STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23452.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (136 aa)    
Predicted Functional Partners:
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
  
 0.948
EFL23451.1
Succinyldiaminopimelate transaminase.
   
 0.930
EFL24151.1
NADH dehydrogenase I, E subunit.
   
 0.924
EFL21599.1
Putative ferredoxin/ferredoxin-NADP reductase.
 
 
 0.852
EFL29295.1
2,4-dienoyl-CoA reductase.
   
 0.834
EFL24557.1
Putative assimilatory nitrate reductase/sulfite reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 0.829
EFL26931.1
Glutamate synthase, small subunit; Truncated CDS.
   
 0.801
EFL28927.1
Glutamate synthase, small subunit.
   
 0.801
EFL23453.1
Putative acetyltransferase.
       0.796
EFL23454.1
Putative transcriptional regulator.
       0.796
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.