STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23468.1Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily. (357 aa)    
Predicted Functional Partners:
EFL23466.1
Oligopeptide ABC transporter, permease.
 
 0.952
EFL23467.1
Oligopeptide transporter (ABC superfamily, atp_bind); Belongs to the ABC transporter superfamily.
 
 
 
0.940
EFL23478.1
Peptide ABC transporter, permease.
 0.927
EFL23488.1
Oligopeptide ABC transporter, permease OppC.
 0.925
EFL23464.1
Peptide ABC transporter, permease.
 0.919
EFL23489.1
Peptide ABC transporter, permease.
 
 0.903
EFL23479.1
Peptide ABC transporter, permease.
 
 0.901
EFL28366.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein.
 
0.887
EFL28703.1
Putative transport system permease protein.
 
 0.884
EFL28050.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
0.879
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.