STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23471.1Putative toxin-antitoxin system, toxin component. (139 aa)    
Predicted Functional Partners:
EFL23470.1
ArsR family toxin-antitoxin system, antitoxin component.
 
    0.935
EFL23469.1
Hypothetical protein.
       0.773
EFL23468.1
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
       0.741
EFL23467.1
Oligopeptide transporter (ABC superfamily, atp_bind); Belongs to the ABC transporter superfamily.
  
    0.714
EFL23466.1
Oligopeptide ABC transporter, permease.
       0.682
EFL23472.1
AraC family transcriptional regulator.
       0.668
EFL25045.1
Putative toxin-antitoxin system, toxin component.
       0.605
EFL28636.1
ArsR family toxin-antitoxin system, antitoxin component.
  
    0.496
EFL25964.1
Nipsnap superfamily protein.
  
     0.464
EFL23465.1
Putative ABC transporter lipoprotein.
       0.461
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.