Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL23478.1Peptide ABC transporter, permease. (339 aa)    
Predicted Functional Partners:
EFL23479.1
Peptide ABC transporter, permease.
 
 0.991
EFL23477.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.986
EFL23480.1
ABC-type oligopeptide transport system.
 
 
 0.984
EFL23489.1
Peptide ABC transporter, permease.
 
 0.963
EFL23476.1
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.960
EFL23487.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.943
EFL20525.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  0.942
EFL23467.1
Oligopeptide transporter (ABC superfamily, atp_bind); Belongs to the ABC transporter superfamily.
  0.939
EFL29172.1
Peptide/opine/nickel uptake family ABC transporter, permease.
 
 0.937
EFL20536.1
Nickel ABC transporter, permease.
 
 0.936
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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