Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL23480.1ABC-type oligopeptide transport system. (536 aa)    
Predicted Functional Partners:
EFL23479.1
Peptide ABC transporter, permease.
 
 0.994
EFL23478.1
Peptide ABC transporter, permease.
 
 
 0.984
EFL23489.1
Peptide ABC transporter, permease.
 
 0.977
EFL23477.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.954
EFL28703.1
Putative transport system permease protein.
 
 0.944
EFL27425.1
Putative transport system permease protein.
 
 0.943
EFL23488.1
Oligopeptide ABC transporter, permease OppC.
 
 
 0.933
EFL20536.1
Nickel ABC transporter, permease.
 
 0.913
EFL28069.1
ABC-type dipeptide/oligopeptide transport permease.
 
 0.905
EFL29172.1
Peptide/opine/nickel uptake family ABC transporter, permease.
 
 0.905
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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