STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23501.1Sensor histidine kinase/response regulator. (592 aa)    
Predicted Functional Partners:
EFL23502.1
Regulatory protein GntR, HTH.
       0.747
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
    0.576
carA
Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
  
    0.559
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
    0.551
EFL22809.1
Sensor histidine kinase/response regulator.
     
 0.493
EFL27138.1
Sensor histidine kinase/response regulator.
     
  0.485
EFL21801.1
Putative integral membrane protein; Truncated CDS; unextendable partial coding region.
   
    0.470
ureC
Urease, alpha subunit.
 
     0.414
ureA
Urease, gamma subunit; Belongs to the urease gamma subunit family.
 
     0.413
ureB
Urease, beta subunit; Belongs to the urease beta subunit family.
 
     0.408
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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