STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23501.1Sensor histidine kinase/response regulator. (592 aa)    
Predicted Functional Partners:
EFL23502.1
Regulatory protein GntR, HTH.
       0.760
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
    0.486
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
    0.482
carA
Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
  
    0.481
EFL21801.1
Putative integral membrane protein; Truncated CDS; unextendable partial coding region.
   
    0.463
ureC
Urease, alpha subunit.
 
   
 0.450
ureA
Urease, gamma subunit; Belongs to the urease gamma subunit family.
 
     0.437
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
     0.424
ureB
Urease, beta subunit; Belongs to the urease beta subunit family.
 
   
 0.422
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.