STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23503.1Aminopeptidase. (476 aa)    
Predicted Functional Partners:
EFL25531.1
Cystathionine beta-synthase.
    
 0.592
EFL23292.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
   0.583
EFL23502.1
Regulatory protein GntR, HTH.
       0.523
EFL21856.1
Conserved hypothetical protein.
  
     0.478
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 0.465
EFL21102.1
Leupeptin-inactivating enzyme 1 (LIE1).
 
 
 
 0.452
EFL20347.1
NADH:flavin oxidoreductase/NADH oxidase.
   
 
 0.442
EFL24780.1
Hypothetical protein.
   
 0.431
EFL21374.1
CBS domain pair protein; Truncated CDS.
  
  
  0.419
EFL26784.1
Cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; Belongs to the sulfur carrier protein TusA family.
  
 
  0.408
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.