STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23511.1Conserved hypothetical protein. (112 aa)    
Predicted Functional Partners:
EFL23512.1
LigA protein.
 
 
   0.772
guaA
GMP synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.
    
 0.735
EFL25960.1
Putative alpha/beta hydrolase family protein.
  
  
  0.670
EFL20414.1
Putative glycosyl hydrolase.
  
     0.663
EFL22394.1
Translation initiation factor IF-2.
  
     0.606
EFL21270.1
Conserved hypothetical protein.
    
 0.588
EFL21720.1
Ankyrin domain protein.
    
 0.588
EFL26386.1
Hypothetical protein.
    
 0.588
EFL26611.1
Hypothetical protein.
    
 0.588
EFL26625.1
Conserved hypothetical protein.
    
 0.588
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.